Cluster: Rep_3024_CGC50
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3024
- CGC Family ID: CGCFAM_03775
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3024_c_25 | Rep_3024_c_25_8 | 6793 | 7704 | + | 3.A.1.1.7 |
| TC | Rep_3024_c_25 | Rep_3024_c_25_9 | 7704 | 8546 | + | 3.A.1.1.25 |
| STP | Rep_3024_c_25 | Rep_3024_c_25_10 | 8616 | 9908 | + | SBP_bac_1 |
| CAZyme | Rep_3024_c_25 | Rep_3024_c_25_11 | 10094 | 12004 | + | GH143 |
Gene ID: Rep_3024_c_25_8
Type: TC
Location: 6793 - 7704 (+)
Type: TC
Location: 6793 - 7704 (+)
Gene ID: Rep_3024_c_25_9
Type: TC
Location: 7704 - 8546 (+)
Type: TC
Location: 7704 - 8546 (+)
Gene ID: Rep_3024_c_25_10
Type: STP
Location: 8616 - 9908 (+)
Type: STP
Location: 8616 - 9908 (+)
Gene ID: Rep_3024_c_25_11
Type: CAZyme
Location: 10094 - 12004 (+)
Type: CAZyme
Location: 10094 - 12004 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.