Cluster: Rep_3024_CGC41
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3024
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3024_c_17 | Rep_3024_c_17_22 | 26903 | 27625 | + | 3.A.1.103.1 |
| pfam | Rep_3024_c_17 | Rep_3024_c_17_23 | 27606 | 28820 | + | Glyco_trans_1_4 |
| pfam | Rep_3024_c_17 | Rep_3024_c_17_24 | 28817 | 30697 | + | RgpF |
| CAZyme | Rep_3024_c_17 | Rep_3024_c_17_25 | 30725 | 31834 | + | GT2 |
| TC | Rep_3024_c_17 | Rep_3024_c_17_26 | 31888 | 33294 | + | 2.A.50.2.1 |
Gene ID: Rep_3024_c_17_22
Type: TC
Location: 26903 - 27625 (+)
Type: TC
Location: 26903 - 27625 (+)
Gene ID: Rep_3024_c_17_23
Type: pfam
Location: 27606 - 28820 (+)
Type: pfam
Location: 27606 - 28820 (+)
Gene ID: Rep_3024_c_17_24
Type: pfam
Location: 28817 - 30697 (+)
Type: pfam
Location: 28817 - 30697 (+)
Gene ID: Rep_3024_c_17_25
Type: CAZyme
Location: 30725 - 31834 (+)
Type: CAZyme
Location: 30725 - 31834 (+)
Gene ID: Rep_3024_c_17_26
Type: TC
Location: 31888 - 33294 (+)
Type: TC
Location: 31888 - 33294 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.