Cluster: Rep_3024_CGC40
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3024
- CGC Family ID: CGCFAM_00870
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3024_c_16 | Rep_3024_c_16_62 | 75773 | 77545 | - | GH9 |
| TC | Rep_3024_c_16 | Rep_3024_c_16_63 | 77655 | 79223 | - | 3.A.1.1.29 |
| TC | Rep_3024_c_16 | Rep_3024_c_16_64 | 79369 | 80271 | - | 3.A.1.1.29 |
| TC | Rep_3024_c_16 | Rep_3024_c_16_65 | 80284 | 81180 | - | 3.A.1.1.29 |
| TF | Rep_3024_c_16 | Rep_3024_c_16_66 | 81523 | 82293 | - | HTH_AraC | HTH_AraC |
| TC | Rep_3024_c_16 | Rep_3024_c_16_67 | 82271 | 84016 | - | 8.A.59.2.1 |
Gene ID: Rep_3024_c_16_62
Type: CAZyme
Location: 75773 - 77545 (-)
Type: CAZyme
Location: 75773 - 77545 (-)
Gene ID: Rep_3024_c_16_63
Type: TC
Location: 77655 - 79223 (-)
Type: TC
Location: 77655 - 79223 (-)
Gene ID: Rep_3024_c_16_64
Type: TC
Location: 79369 - 80271 (-)
Type: TC
Location: 79369 - 80271 (-)
Gene ID: Rep_3024_c_16_65
Type: TC
Location: 80284 - 81180 (-)
Type: TC
Location: 80284 - 81180 (-)
Gene ID: Rep_3024_c_16_66
Type: TF
Location: 81523 - 82293 (-)
Type: TF
Location: 81523 - 82293 (-)
Gene ID: Rep_3024_c_16_67
Type: TC
Location: 82271 - 84016 (-)
Type: TC
Location: 82271 - 84016 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.