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Cluster: Rep_3024_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3024_c_15 Rep_3024_c_15_45 46003 46851 - 3.A.1.144.3
peptidase Rep_3024_c_15 Rep_3024_c_15_46 46983 47627 - S54.UNW
CAZyme Rep_3024_c_15 Rep_3024_c_15_47 47869 48921 - GH33
TF Rep_3024_c_15 Rep_3024_c_15_48 48975 49727 - GntR
TC Rep_3024_c_15 Rep_3024_c_15_49 49724 51376 - 3.D.10.1.3
pfam Rep_3024_c_15 Rep_3024_c_15_50 51468 52787 - SBP_bac_1 | SBP_bac_8
TC Rep_3024_c_15 Rep_3024_c_15_51 52839 53672 - 3.A.1.1.20
TC Rep_3024_c_15 Rep_3024_c_15_52 53672 54544 - 3.A.1.1.36
Gene ID: Rep_3024_c_15_45
Type: TC
Location: 46003 - 46851 (-)
Gene ID: Rep_3024_c_15_46
Type: peptidase
Location: 46983 - 47627 (-)
Gene ID: Rep_3024_c_15_47
Type: CAZyme
Location: 47869 - 48921 (-)
Gene ID: Rep_3024_c_15_48
Type: TF
Location: 48975 - 49727 (-)
Gene ID: Rep_3024_c_15_49
Type: TC
Location: 49724 - 51376 (-)
Gene ID: Rep_3024_c_15_50
Type: pfam
Location: 51468 - 52787 (-)
Gene ID: Rep_3024_c_15_51
Type: TC
Location: 52839 - 53672 (-)
Gene ID: Rep_3024_c_15_52
Type: TC
Location: 53672 - 54544 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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