Cluster: Rep_3024_CGC36
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3024
- CGC Family ID: CGCFAM_01088
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3024_c_15 | Rep_3024_c_15_35 | 34518 | 35408 | + | 3.A.1.1.20 |
| TC | Rep_3024_c_15 | Rep_3024_c_15_36 | 35415 | 36281 | + | 3.A.1.1.18 |
| pfam | Rep_3024_c_15 | Rep_3024_c_15_37 | 36298 | 37284 | + | URO-D |
| CAZyme | Rep_3024_c_15 | Rep_3024_c_15_38 | 37342 | 39657 | + | GH2 |
Gene ID: Rep_3024_c_15_35
Type: TC
Location: 34518 - 35408 (+)
Type: TC
Location: 34518 - 35408 (+)
Gene ID: Rep_3024_c_15_36
Type: TC
Location: 35415 - 36281 (+)
Type: TC
Location: 35415 - 36281 (+)
Gene ID: Rep_3024_c_15_37
Type: pfam
Location: 36298 - 37284 (+)
Type: pfam
Location: 36298 - 37284 (+)
Gene ID: Rep_3024_c_15_38
Type: CAZyme
Location: 37342 - 39657 (+)
Type: CAZyme
Location: 37342 - 39657 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.