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Cluster: Rep_3024_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3024_c_12 Rep_3024_c_12_63 67675 69345 - GH13_31
CAZyme Rep_3024_c_12 Rep_3024_c_12_64 69523 71820 + GH65
TC Rep_3024_c_12 Rep_3024_c_12_65 71807 73588 + 8.A.59.2.1
TF Rep_3024_c_12 Rep_3024_c_12_66 73589 75091 + HTH_AraC | HTH_AraC
TC Rep_3024_c_12 Rep_3024_c_12_67 75233 76465 + 3.A.1.1.28
TC Rep_3024_c_12 Rep_3024_c_12_68 76578 77474 + 3.A.1.1.42
TC Rep_3024_c_12 Rep_3024_c_12_69 77477 78355 + 3.A.1.1.28
Gene ID: Rep_3024_c_12_63
Type: CAZyme
Location: 67675 - 69345 (-)
Gene ID: Rep_3024_c_12_64
Type: CAZyme
Location: 69523 - 71820 (+)
Gene ID: Rep_3024_c_12_65
Type: TC
Location: 71807 - 73588 (+)
Gene ID: Rep_3024_c_12_66
Type: TF
Location: 73589 - 75091 (+)
Gene ID: Rep_3024_c_12_67
Type: TC
Location: 75233 - 76465 (+)
Gene ID: Rep_3024_c_12_68
Type: TC
Location: 76578 - 77474 (+)
Gene ID: Rep_3024_c_12_69
Type: TC
Location: 77477 - 78355 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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