Cluster: Rep_3024_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3024
- CGC Family ID: CGCFAM_00847
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3024_c_11 | Rep_3024_c_11_22 | 30508 | 32676 | - | GH112 |
| pfam | Rep_3024_c_11 | Rep_3024_c_11_23 | 32688 | 32864 | - | DUF6903 |
| TC | Rep_3024_c_11 | Rep_3024_c_11_24 | 32872 | 33765 | - | 3.A.1.1.47 |
| TC | Rep_3024_c_11 | Rep_3024_c_11_25 | 33780 | 34673 | - | 3.A.1.1.20 |
Gene ID: Rep_3024_c_11_22
Type: CAZyme
Location: 30508 - 32676 (-)
Type: CAZyme
Location: 30508 - 32676 (-)
Gene ID: Rep_3024_c_11_23
Type: pfam
Location: 32688 - 32864 (-)
Type: pfam
Location: 32688 - 32864 (-)
Gene ID: Rep_3024_c_11_24
Type: TC
Location: 32872 - 33765 (-)
Type: TC
Location: 32872 - 33765 (-)
Gene ID: Rep_3024_c_11_25
Type: TC
Location: 33780 - 34673 (-)
Type: TC
Location: 33780 - 34673 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.