Cluster: Rep_3024_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3024
- CGC Family ID: CGCFAM_03176
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3024_c_11 | Rep_3024_c_11_9 | 12157 | 13866 | - | 9.B.33.1.1 |
| STP | Rep_3024_c_11 | Rep_3024_c_11_10 | 14151 | 15458 | + | SBP_bac_1 |
| TC | Rep_3024_c_11 | Rep_3024_c_11_11 | 15538 | 16431 | + | 3.A.1.1.18 |
| TC | Rep_3024_c_11 | Rep_3024_c_11_12 | 16433 | 17293 | + | 3.A.1.1.18 |
| CAZyme | Rep_3024_c_11 | Rep_3024_c_11_13 | 17389 | 19245 | + | GH5_19 |
Gene ID: Rep_3024_c_11_9
Type: TC
Location: 12157 - 13866 (-)
Type: TC
Location: 12157 - 13866 (-)
Gene ID: Rep_3024_c_11_10
Type: STP
Location: 14151 - 15458 (+)
Type: STP
Location: 14151 - 15458 (+)
Gene ID: Rep_3024_c_11_11
Type: TC
Location: 15538 - 16431 (+)
Type: TC
Location: 15538 - 16431 (+)
Gene ID: Rep_3024_c_11_12
Type: TC
Location: 16433 - 17293 (+)
Type: TC
Location: 16433 - 17293 (+)
Gene ID: Rep_3024_c_11_13
Type: CAZyme
Location: 17389 - 19245 (+)
Type: CAZyme
Location: 17389 - 19245 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.