Cluster: Rep_3024_CGC28
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3024
- CGC Family ID: CGCFAM_00654
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3024_c_10 | Rep_3024_c_10_91 | 112730 | 113653 | + | GT2 |
| pfam | Rep_3024_c_10 | Rep_3024_c_10_92 | 113659 | 114702 | - | ApbE |
| TC | Rep_3024_c_10 | Rep_3024_c_10_93 | 114768 | 116102 | - | 2.A.66.1.33 |
Gene ID: Rep_3024_c_10_91
Type: CAZyme
Location: 112730 - 113653 (+)
Type: CAZyme
Location: 112730 - 113653 (+)
Gene ID: Rep_3024_c_10_92
Type: pfam
Location: 113659 - 114702 (-)
Type: pfam
Location: 113659 - 114702 (-)
Gene ID: Rep_3024_c_10_93
Type: TC
Location: 114768 - 116102 (-)
Type: TC
Location: 114768 - 116102 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.