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Cluster: Rep_3024_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3024_c_9 Rep_3024_c_9_82 116598 118673 - GH3
pfam Rep_3024_c_9 Rep_3024_c_9_83 118851 120980 - ADP_ribosyl_GH
TC Rep_3024_c_9 Rep_3024_c_9_84 121000 121836 - 3.A.1.1.26
TC Rep_3024_c_9 Rep_3024_c_9_85 121833 122753 - 3.A.1.1.25
STP Rep_3024_c_9 Rep_3024_c_9_86 122849 124159 - SBP_bac_1
TF Rep_3024_c_9 Rep_3024_c_9_87 124272 125027 - HTH_AraC | HTH_AraC
TC Rep_3024_c_9 Rep_3024_c_9_88 125008 126816 - 8.A.59.2.1
CAZyme Rep_3024_c_9 Rep_3024_c_9_89 126993 128504 - GH39
Gene ID: Rep_3024_c_9_82
Type: CAZyme
Location: 116598 - 118673 (-)
Gene ID: Rep_3024_c_9_83
Type: pfam
Location: 118851 - 120980 (-)
Gene ID: Rep_3024_c_9_84
Type: TC
Location: 121000 - 121836 (-)
Gene ID: Rep_3024_c_9_85
Type: TC
Location: 121833 - 122753 (-)
Gene ID: Rep_3024_c_9_86
Type: STP
Location: 122849 - 124159 (-)
Gene ID: Rep_3024_c_9_87
Type: TF
Location: 124272 - 125027 (-)
Gene ID: Rep_3024_c_9_88
Type: TC
Location: 125008 - 126816 (-)
Gene ID: Rep_3024_c_9_89
Type: CAZyme
Location: 126993 - 128504 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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