Cluster: Rep_3024_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3024
- CGC Family ID: CGCFAM_05421
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3024_c_8 | Rep_3024_c_8_98 | 114774 | 115547 | - | 3.A.1.34.1 |
| TC | Rep_3024_c_8 | Rep_3024_c_8_99 | 115540 | 116421 | - | 3.A.1.34.1 |
| TC | Rep_3024_c_8 | Rep_3024_c_8_100 | 116488 | 117471 | - | 3.A.1.34.1 |
| CAZyme | Rep_3024_c_8 | Rep_3024_c_8_101 | 117959 | 118747 | + | CE1 |
| TC | Rep_3024_c_8 | Rep_3024_c_8_102 | 118741 | 119565 | + | 1.C.109.1.5 |
Gene ID: Rep_3024_c_8_98
Type: TC
Location: 114774 - 115547 (-)
Type: TC
Location: 114774 - 115547 (-)
Gene ID: Rep_3024_c_8_99
Type: TC
Location: 115540 - 116421 (-)
Type: TC
Location: 115540 - 116421 (-)
Gene ID: Rep_3024_c_8_100
Type: TC
Location: 116488 - 117471 (-)
Type: TC
Location: 116488 - 117471 (-)
Gene ID: Rep_3024_c_8_101
Type: CAZyme
Location: 117959 - 118747 (+)
Type: CAZyme
Location: 117959 - 118747 (+)
Gene ID: Rep_3024_c_8_102
Type: TC
Location: 118741 - 119565 (+)
Type: TC
Location: 118741 - 119565 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.