Cluster: Rep_3024_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3024
- CGC Family ID: CGCFAM_00203
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3024_c_8 | Rep_3024_c_8_2 | 4085 | 7111 | - | GH2 |
| CAZyme | Rep_3024_c_8 | Rep_3024_c_8_3 | 7108 | 9870 | - | GH2 |
| TC | Rep_3024_c_8 | Rep_3024_c_8_4 | 9952 | 10764 | - | 3.A.1.1.4 |
| TC | Rep_3024_c_8 | Rep_3024_c_8_5 | 10761 | 11678 | - | 3.A.1.1.4 |
| TC | Rep_3024_c_8 | Rep_3024_c_8_6 | 11762 | 13042 | - | 3.A.1.1.4 |
Gene ID: Rep_3024_c_8_2
Type: CAZyme
Location: 4085 - 7111 (-)
Type: CAZyme
Location: 4085 - 7111 (-)
Gene ID: Rep_3024_c_8_3
Type: CAZyme
Location: 7108 - 9870 (-)
Type: CAZyme
Location: 7108 - 9870 (-)
Gene ID: Rep_3024_c_8_4
Type: TC
Location: 9952 - 10764 (-)
Type: TC
Location: 9952 - 10764 (-)
Gene ID: Rep_3024_c_8_5
Type: TC
Location: 10761 - 11678 (-)
Type: TC
Location: 10761 - 11678 (-)
Gene ID: Rep_3024_c_8_6
Type: TC
Location: 11762 - 13042 (-)
Type: TC
Location: 11762 - 13042 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.