Cluster: Rep_3024_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3024
- CGC Family ID: CGCFAM_00861
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3024_c_7 | Rep_3024_c_7_90 | 102246 | 104270 | - | 3.A.16.1.1 |
| pfam | Rep_3024_c_7 | Rep_3024_c_7_91 | 104463 | 104867 | - | DUF2304 |
| CAZyme | Rep_3024_c_7 | Rep_3024_c_7_92 | 104864 | 105562 | - | GT2 |
| CAZyme | Rep_3024_c_7 | Rep_3024_c_7_93 | 105576 | 106601 | - | GT2 |
Gene ID: Rep_3024_c_7_90
Type: TC
Location: 102246 - 104270 (-)
Type: TC
Location: 102246 - 104270 (-)
Gene ID: Rep_3024_c_7_91
Type: pfam
Location: 104463 - 104867 (-)
Type: pfam
Location: 104463 - 104867 (-)
Gene ID: Rep_3024_c_7_92
Type: CAZyme
Location: 104864 - 105562 (-)
Type: CAZyme
Location: 104864 - 105562 (-)
Gene ID: Rep_3024_c_7_93
Type: CAZyme
Location: 105576 - 106601 (-)
Type: CAZyme
Location: 105576 - 106601 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.