Cluster: Rep_3024_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_3024
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3024_c_6 | Rep_3024_c_6_119 | 129342 | 132284 | + | 3.A.12.1.1 |
| peptidase | Rep_3024_c_6 | Rep_3024_c_6_120 | 132407 | 133720 | + | M38.UNW |
| CAZyme | Rep_3024_c_6 | Rep_3024_c_6_121 | 133733 | 134932 | + | GT4 |
| CAZyme | Rep_3024_c_6 | Rep_3024_c_6_122 | 134936 | 136141 | + | GT4 |
| CAZyme | Rep_3024_c_6 | Rep_3024_c_6_123 | 136138 | 137340 | + | GT4 |
| NULL(UNKNOWN) | Rep_3024_c_6 | Rep_3024_c_6_124 | 137335 | 137718 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3024_c_6 | Rep_3024_c_6_125 | 137877 | 138563 | - | 9.B.20.1.4 |
Gene ID: Rep_3024_c_6_119
Type: TC
Location: 129342 - 132284 (+)
Type: TC
Location: 129342 - 132284 (+)
Gene ID: Rep_3024_c_6_120
Type: peptidase
Location: 132407 - 133720 (+)
Type: peptidase
Location: 132407 - 133720 (+)
Gene ID: Rep_3024_c_6_121
Type: CAZyme
Location: 133733 - 134932 (+)
Type: CAZyme
Location: 133733 - 134932 (+)
Gene ID: Rep_3024_c_6_122
Type: CAZyme
Location: 134936 - 136141 (+)
Type: CAZyme
Location: 134936 - 136141 (+)
Gene ID: Rep_3024_c_6_123
Type: CAZyme
Location: 136138 - 137340 (+)
Type: CAZyme
Location: 136138 - 137340 (+)
Gene ID: Rep_3024_c_6_124
Type:
Location: 137335 - 137718 (-)
Type:
Location: 137335 - 137718 (-)
Gene ID: Rep_3024_c_6_125
Type: TC
Location: 137877 - 138563 (-)
Type: TC
Location: 137877 - 138563 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.