Cluster: Rep_3024_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3024
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3024_c_0 | Rep_3024_c_0_136 | 157802 | 158695 | + | 3.A.1.1.25 |
| TC | Rep_3024_c_0 | Rep_3024_c_0_137 | 158692 | 159534 | + | 3.A.1.1.41 |
| pfam | Rep_3024_c_0 | Rep_3024_c_0_138 | 159561 | 160028 | + | Ribonuc_L-PSP | YjgF_endoribonc |
| pfam | Rep_3024_c_0 | Rep_3024_c_0_139 | 160045 | 160494 | + | YjgF_endoribonc |
| CAZyme | Rep_3024_c_0 | Rep_3024_c_0_140 | 160759 | 162057 | + | GH4 |
Gene ID: Rep_3024_c_0_136
Type: TC
Location: 157802 - 158695 (+)
Type: TC
Location: 157802 - 158695 (+)
Gene ID: Rep_3024_c_0_137
Type: TC
Location: 158692 - 159534 (+)
Type: TC
Location: 158692 - 159534 (+)
Gene ID: Rep_3024_c_0_138
Type: pfam
Location: 159561 - 160028 (+)
Type: pfam
Location: 159561 - 160028 (+)
Gene ID: Rep_3024_c_0_139
Type: pfam
Location: 160045 - 160494 (+)
Type: pfam
Location: 160045 - 160494 (+)
Gene ID: Rep_3024_c_0_140
Type: CAZyme
Location: 160759 - 162057 (+)
Type: CAZyme
Location: 160759 - 162057 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.