Cluster: Rep_3024_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3024
- CGC Family ID: CGCFAM_03526
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3024_c_6 | Rep_3024_c_6_112 | 120494 | 121633 | + | 3.A.1.122.2 |
| TC | Rep_3024_c_6 | Rep_3024_c_6_113 | 121829 | 122950 | + | 3.A.1.1.26 |
| NULL(UNKNOWN) | Rep_3024_c_6 | Rep_3024_c_6_114 | 123082 | 124125 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3024_c_6 | Rep_3024_c_6_115 | 124195 | 126453 | + | GH65 |
Gene ID: Rep_3024_c_6_112
Type: TC
Location: 120494 - 121633 (+)
Type: TC
Location: 120494 - 121633 (+)
Gene ID: Rep_3024_c_6_113
Type: TC
Location: 121829 - 122950 (+)
Type: TC
Location: 121829 - 122950 (+)
Gene ID: Rep_3024_c_6_114
Type:
Location: 123082 - 124125 (+)
Type:
Location: 123082 - 124125 (+)
Gene ID: Rep_3024_c_6_115
Type: CAZyme
Location: 124195 - 126453 (+)
Type: CAZyme
Location: 124195 - 126453 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.