Cluster: Rep_3024_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_3024
- CGC Family ID: CGCFAM_04508
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3024_c_4 | Rep_3024_c_4_105 | 109101 | 111023 | - | GH127 |
| CAZyme | Rep_3024_c_4 | Rep_3024_c_4_106 | 111044 | 112102 | - | GH5_13 |
| CAZyme | Rep_3024_c_4 | Rep_3024_c_4_107 | 112119 | 113576 | - | GH51_1 |
| TC | Rep_3024_c_4 | Rep_3024_c_4_108 | 113639 | 114532 | - | 3.A.1.1.29 |
| TC | Rep_3024_c_4 | Rep_3024_c_4_109 | 114550 | 115464 | - | 3.A.1.1.10 |
| STP | Rep_3024_c_4 | Rep_3024_c_4_110 | 115565 | 117145 | - | SBP_bac_1 |
| CAZyme | Rep_3024_c_4 | Rep_3024_c_4_111 | 117367 | 119340 | - | GH127 |
Gene ID: Rep_3024_c_4_105
Type: CAZyme
Location: 109101 - 111023 (-)
Type: CAZyme
Location: 109101 - 111023 (-)
Gene ID: Rep_3024_c_4_106
Type: CAZyme
Location: 111044 - 112102 (-)
Type: CAZyme
Location: 111044 - 112102 (-)
Gene ID: Rep_3024_c_4_107
Type: CAZyme
Location: 112119 - 113576 (-)
Type: CAZyme
Location: 112119 - 113576 (-)
Gene ID: Rep_3024_c_4_108
Type: TC
Location: 113639 - 114532 (-)
Type: TC
Location: 113639 - 114532 (-)
Gene ID: Rep_3024_c_4_109
Type: TC
Location: 114550 - 115464 (-)
Type: TC
Location: 114550 - 115464 (-)
Gene ID: Rep_3024_c_4_110
Type: STP
Location: 115565 - 117145 (-)
Type: STP
Location: 115565 - 117145 (-)
Gene ID: Rep_3024_c_4_111
Type: CAZyme
Location: 117367 - 119340 (-)
Type: CAZyme
Location: 117367 - 119340 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.