Cluster: Rep_3024_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3024
- CGC Family ID: CGCFAM_11051
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3024_c_0 | Rep_3024_c_0_118 | 135813 | 136817 | + | 3.A.1.5.16 |
| TC | Rep_3024_c_0 | Rep_3024_c_0_119 | 136834 | 138084 | + | 3.A.1.5.6 |
| TC | Rep_3024_c_0 | Rep_3024_c_0_120 | 138098 | 139108 | + | 3.A.1.5.16 |
| TC | Rep_3024_c_0 | Rep_3024_c_0_121 | 139098 | 139922 | + | 3.A.1.5.16 |
| CAZyme | Rep_3024_c_0 | Rep_3024_c_0_122 | 139941 | 142214 | + | GH3 |
Gene ID: Rep_3024_c_0_118
Type: TC
Location: 135813 - 136817 (+)
Type: TC
Location: 135813 - 136817 (+)
Gene ID: Rep_3024_c_0_119
Type: TC
Location: 136834 - 138084 (+)
Type: TC
Location: 136834 - 138084 (+)
Gene ID: Rep_3024_c_0_120
Type: TC
Location: 138098 - 139108 (+)
Type: TC
Location: 138098 - 139108 (+)
Gene ID: Rep_3024_c_0_121
Type: TC
Location: 139098 - 139922 (+)
Type: TC
Location: 139098 - 139922 (+)
Gene ID: Rep_3024_c_0_122
Type: CAZyme
Location: 139941 - 142214 (+)
Type: CAZyme
Location: 139941 - 142214 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.