Cluster: Rep_3012_CGC44
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3012
- CGC Family ID: CGCFAM_07949
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3012_c_1 | Rep_3012_c_1_2505 | 2725510 | 2726262 | - | 3.A.1.14.16 |
| TC | Rep_3012_c_1 | Rep_3012_c_1_2506 | 2726259 | 2727290 | - | 3.A.1.14.21 |
| STP | Rep_3012_c_1 | Rep_3012_c_1_2507 | 2727843 | 2728667 | - | Peripla_BP_2 |
| CAZyme | Rep_3012_c_1 | Rep_3012_c_1_2508 | 2729465 | 2730286 | + | GT2 |
| TC | Rep_3012_c_1 | Rep_3012_c_1_2509 | 2730560 | 2731336 | + | 2.A.79.1.5 |
Gene ID: Rep_3012_c_1_2505
Type: TC
Location: 2725510 - 2726262 (-)
Type: TC
Location: 2725510 - 2726262 (-)
Gene ID: Rep_3012_c_1_2506
Type: TC
Location: 2726259 - 2727290 (-)
Type: TC
Location: 2726259 - 2727290 (-)
Gene ID: Rep_3012_c_1_2507
Type: STP
Location: 2727843 - 2728667 (-)
Type: STP
Location: 2727843 - 2728667 (-)
Gene ID: Rep_3012_c_1_2508
Type: CAZyme
Location: 2729465 - 2730286 (+)
Type: CAZyme
Location: 2729465 - 2730286 (+)
Gene ID: Rep_3012_c_1_2509
Type: TC
Location: 2730560 - 2731336 (+)
Type: TC
Location: 2730560 - 2731336 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
UBA11524
Species
UBA11524 sp000437595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3012_c_1_2505 | vegetarian > vegan | 1.26400 | 0.00307 |
| Rep_3012_c_1_2506 | vegetarian > vegan | 1.24710 | 0.00307 |
| Rep_3012_c_1_2507 | vegetarian > vegan | 1.27644 | 0.00307 |
| Rep_3012_c_1_2508 | vegetarian > vegan | 1.15204 | 0.00307 |
| Rep_3012_c_1_2509 | vegetarian > vegan | 1.15781 | 0.00307 |