Cluster: Rep_3012_CGC38
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_3012
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3012_c_1 | Rep_3012_c_1_2145 | 2324438 | 2325787 | - | GH43_35 |
| pfam | Rep_3012_c_1 | Rep_3012_c_1_2146 | 2325931 | 2326707 | + | DeoC |
| TC | Rep_3012_c_1 | Rep_3012_c_1_2147 | 2326929 | 2328344 | - | 2.A.40.7.6 |
| pfam | Rep_3012_c_1 | Rep_3012_c_1_2148 | 2334400 | 2334660 | - | DUF2264 |
| CAZyme | Rep_3012_c_1 | Rep_3012_c_1_2149 | 2334689 | 2335537 | - | GH154 |
| NULL(UNKNOWN) | Rep_3012_c_1 | Rep_3012_c_1_2150 | 2335539 | 2336327 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3012_c_1 | Rep_3012_c_1_2151 | 2336338 | 2337456 | - | GH88 |
| TC | Rep_3012_c_1 | Rep_3012_c_1_2152 | 2337538 | 2338413 | - | 3.A.1.1.36 |
| TC | Rep_3012_c_1 | Rep_3012_c_1_2153 | 2338432 | 2339400 | - | 3.A.1.1.36 |
| STP | Rep_3012_c_1 | Rep_3012_c_1_2154 | 2339521 | 2340768 | - | SBP_bac_1 |
| TF | Rep_3012_c_1 | Rep_3012_c_1_2155 | 2341148 | 2342209 | + | LacI |
| CAZyme | Rep_3012_c_1 | Rep_3012_c_1_2156 | 2342546 | 2344282 | + | GH2 |
Gene ID: Rep_3012_c_1_2145
Type: CAZyme
Location: 2324438 - 2325787 (-)
Type: CAZyme
Location: 2324438 - 2325787 (-)
Gene ID: Rep_3012_c_1_2146
Type: pfam
Location: 2325931 - 2326707 (+)
Type: pfam
Location: 2325931 - 2326707 (+)
Gene ID: Rep_3012_c_1_2147
Type: TC
Location: 2326929 - 2328344 (-)
Type: TC
Location: 2326929 - 2328344 (-)
Gene ID: Rep_3012_c_1_2148
Type: pfam
Location: 2334400 - 2334660 (-)
Type: pfam
Location: 2334400 - 2334660 (-)
Gene ID: Rep_3012_c_1_2149
Type: CAZyme
Location: 2334689 - 2335537 (-)
Type: CAZyme
Location: 2334689 - 2335537 (-)
Gene ID: Rep_3012_c_1_2150
Type:
Location: 2335539 - 2336327 (-)
Type:
Location: 2335539 - 2336327 (-)
Gene ID: Rep_3012_c_1_2151
Type: CAZyme
Location: 2336338 - 2337456 (-)
Type: CAZyme
Location: 2336338 - 2337456 (-)
Gene ID: Rep_3012_c_1_2152
Type: TC
Location: 2337538 - 2338413 (-)
Type: TC
Location: 2337538 - 2338413 (-)
Gene ID: Rep_3012_c_1_2153
Type: TC
Location: 2338432 - 2339400 (-)
Type: TC
Location: 2338432 - 2339400 (-)
Gene ID: Rep_3012_c_1_2154
Type: STP
Location: 2339521 - 2340768 (-)
Type: STP
Location: 2339521 - 2340768 (-)
Gene ID: Rep_3012_c_1_2155
Type: TF
Location: 2341148 - 2342209 (+)
Type: TF
Location: 2341148 - 2342209 (+)
Gene ID: Rep_3012_c_1_2156
Type: CAZyme
Location: 2342546 - 2344282 (+)
Type: CAZyme
Location: 2342546 - 2344282 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
UBA11524
Species
UBA11524 sp000437595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3012_c_1_2146 | vegetarian > vegan | 1.00192 | 0.00307 |