dbCAN Logo

Cluster: Rep_3012_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3012_c_1 Rep_3012_c_1_2084 2244468 2245076 - GH172
pfam Rep_3012_c_1 Rep_3012_c_1_2085 2245015 2245497 - DUF2961
TC Rep_3012_c_1 Rep_3012_c_1_2086 2246018 2247391 - 2.A.66.1.32
NULL(UNKNOWN) Rep_3012_c_1 Rep_3012_c_1_2087 2247669 2248712 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_3012_c_1 Rep_3012_c_1_2088 2248828 2249700 + ATP_bind_3
CAZyme Rep_3012_c_1 Rep_3012_c_1_2089 2249838 2250872 - CE4
Gene ID: Rep_3012_c_1_2084
Type: CAZyme
Location: 2244468 - 2245076 (-)
Gene ID: Rep_3012_c_1_2085
Type: pfam
Location: 2245015 - 2245497 (-)
Gene ID: Rep_3012_c_1_2086
Type: TC
Location: 2246018 - 2247391 (-)
Gene ID: Rep_3012_c_1_2087
Type:
Location: 2247669 - 2248712 (+)
Gene ID: Rep_3012_c_1_2088
Type: pfam
Location: 2248828 - 2249700 (+)
Gene ID: Rep_3012_c_1_2089
Type: CAZyme
Location: 2249838 - 2250872 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_3012_c_1_2084 vegetarian > vegan 1.07961 0.00307
Rep_3012_c_1_2085 vegetarian > vegan 1.07613 0.00307
Rep_3012_c_1_2087 vegetarian > vegan 1.03469 0.00307
Rep_3012_c_1_2089 vegetarian > vegan 1.18022 0.00307

🧭 Explore Read Mapping of CGC

← Back to Cluster List