Cluster: Rep_3012_CGC33
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_3012
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3012_c_1 | Rep_3012_c_1_1828 | 1968506 | 1970920 | - | GT2 | GT4 |
| CAZyme | Rep_3012_c_1 | Rep_3012_c_1_1829 | 1970948 | 1972024 | - | CE2 |
| CAZyme | Rep_3012_c_1 | Rep_3012_c_1_1830 | 1972021 | 1973091 | - | CE2 |
| STP | Rep_3012_c_1 | Rep_3012_c_1_1831 | 1973223 | 1974596 | - | SBP_bac_1 |
| pfam | Rep_3012_c_1 | Rep_3012_c_1_1832 | 1974719 | 1976509 | - | CBM65_1 | CBM65_1 | CBM65_1 |
| TC | Rep_3012_c_1 | Rep_3012_c_1_1833 | 1976907 | 1977836 | - | 3.A.1.1.11 |
| TC | Rep_3012_c_1 | Rep_3012_c_1_1834 | 1977858 | 1978775 | - | 3.A.1.1.20 |
Gene ID: Rep_3012_c_1_1828
Type: CAZyme
Location: 1968506 - 1970920 (-)
Type: CAZyme
Location: 1968506 - 1970920 (-)
Gene ID: Rep_3012_c_1_1829
Type: CAZyme
Location: 1970948 - 1972024 (-)
Type: CAZyme
Location: 1970948 - 1972024 (-)
Gene ID: Rep_3012_c_1_1830
Type: CAZyme
Location: 1972021 - 1973091 (-)
Type: CAZyme
Location: 1972021 - 1973091 (-)
Gene ID: Rep_3012_c_1_1831
Type: STP
Location: 1973223 - 1974596 (-)
Type: STP
Location: 1973223 - 1974596 (-)
Gene ID: Rep_3012_c_1_1832
Type: pfam
Location: 1974719 - 1976509 (-)
Type: pfam
Location: 1974719 - 1976509 (-)
Gene ID: Rep_3012_c_1_1833
Type: TC
Location: 1976907 - 1977836 (-)
Type: TC
Location: 1976907 - 1977836 (-)
Gene ID: Rep_3012_c_1_1834
Type: TC
Location: 1977858 - 1978775 (-)
Type: TC
Location: 1977858 - 1978775 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
UBA11524
Species
UBA11524 sp000437595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3012_c_1_1828 | vegetarian > vegan | 1.18849 | 0.00307 |
| Rep_3012_c_1_1829 | vegetarian > vegan | 1.17316 | 0.00307 |
| Rep_3012_c_1_1830 | vegetarian > vegan | 1.01190 | 0.00307 |
| Rep_3012_c_1_1831 | vegetarian > vegan | 1.03511 | 0.00307 |
| Rep_3012_c_1_1832 | vegetarian > vegan | 1.08912 | 0.00307 |
| Rep_3012_c_1_1833 | vegetarian > vegan | 1.09060 | 0.00307 |
| Rep_3012_c_1_1834 | vegetarian > vegan | 1.02493 | 0.00307 |