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Cluster: Rep_3012_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3012_c_1 Rep_3012_c_1_1652 1767421 1768485 - 3.A.1.2.3
TC Rep_3012_c_1 Rep_3012_c_1_1653 1768501 1769319 - 3.A.1.2.3
TC Rep_3012_c_1 Rep_3012_c_1_1654 1769364 1769972 - 3.A.1.2.3
TC Rep_3012_c_1 Rep_3012_c_1_1655 1769935 1770150 - 3.A.1.2.3
pfam Rep_3012_c_1 Rep_3012_c_1_1656 1770327 1771400 - Peripla_BP_4
CAZyme Rep_3012_c_1 Rep_3012_c_1_1657 1772213 1774258 - GH105
Gene ID: Rep_3012_c_1_1652
Type: TC
Location: 1767421 - 1768485 (-)
Gene ID: Rep_3012_c_1_1653
Type: TC
Location: 1768501 - 1769319 (-)
Gene ID: Rep_3012_c_1_1654
Type: TC
Location: 1769364 - 1769972 (-)
Gene ID: Rep_3012_c_1_1655
Type: TC
Location: 1769935 - 1770150 (-)
Gene ID: Rep_3012_c_1_1656
Type: pfam
Location: 1770327 - 1771400 (-)
Gene ID: Rep_3012_c_1_1657
Type: CAZyme
Location: 1772213 - 1774258 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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