Cluster: Rep_3012_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3012
- CGC Family ID: CGCFAM_00527
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3012_c_1 | Rep_3012_c_1_54 | 59780 | 60751 | - | GT2 |
| TF | Rep_3012_c_1 | Rep_3012_c_1_55 | 60950 | 61429 | + | HTH_3 |
| TC | Rep_3012_c_1 | Rep_3012_c_1_56 | 61584 | 63839 | + | 3.A.11.3.1 |
Gene ID: Rep_3012_c_1_54
Type: CAZyme
Location: 59780 - 60751 (-)
Type: CAZyme
Location: 59780 - 60751 (-)
Gene ID: Rep_3012_c_1_55
Type: TF
Location: 60950 - 61429 (+)
Type: TF
Location: 60950 - 61429 (+)
Gene ID: Rep_3012_c_1_56
Type: TC
Location: 61584 - 63839 (+)
Type: TC
Location: 61584 - 63839 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
UBA11524
Species
UBA11524 sp000437595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3012_c_1_55 | vegetarian > vegan | 1.31431 | 0.00307 |
| Rep_3012_c_1_56 | vegetarian > vegan | 1.13499 | 0.00307 |