Cluster: Rep_3012_CGC27
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3012
- CGC Family ID: CGCFAM_00624
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3012_c_1 | Rep_3012_c_1_1577 | 1675973 | 1677049 | - | GT28 |
| pfam | Rep_3012_c_1 | Rep_3012_c_1_1578 | 1677341 | 1677610 | + | DUF3842 |
| TC | Rep_3012_c_1 | Rep_3012_c_1_1579 | 1677778 | 1678362 | - | 4.F.1.1.7 |
Gene ID: Rep_3012_c_1_1577
Type: CAZyme
Location: 1675973 - 1677049 (-)
Type: CAZyme
Location: 1675973 - 1677049 (-)
Gene ID: Rep_3012_c_1_1578
Type: pfam
Location: 1677341 - 1677610 (+)
Type: pfam
Location: 1677341 - 1677610 (+)
Gene ID: Rep_3012_c_1_1579
Type: TC
Location: 1677778 - 1678362 (-)
Type: TC
Location: 1677778 - 1678362 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
UBA11524
Species
UBA11524 sp000437595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3012_c_1_1577 | vegetarian > vegan | 1.28964 | 0.00307 |
| Rep_3012_c_1_1578 | vegetarian > vegan | 1.47027 | 0.00307 |
| Rep_3012_c_1_1579 | vegetarian > vegan | 1.46892 | 0.00307 |