Cluster: Rep_3012_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3012
- CGC Family ID: CGCFAM_00606
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3012_c_1 | Rep_3012_c_1_1544 | 1632897 | 1634522 | + | 2.A.58.2.2 |
| pfam | Rep_3012_c_1 | Rep_3012_c_1_1545 | 1634575 | 1635336 | - | UPF0489 |
| pfam | Rep_3012_c_1 | Rep_3012_c_1_1546 | 1635343 | 1636035 | - | Spore_YunB |
| CAZyme | Rep_3012_c_1 | Rep_3012_c_1_1547 | 1636192 | 1638759 | + | GT51 |
Gene ID: Rep_3012_c_1_1544
Type: TC
Location: 1632897 - 1634522 (+)
Type: TC
Location: 1632897 - 1634522 (+)
Gene ID: Rep_3012_c_1_1545
Type: pfam
Location: 1634575 - 1635336 (-)
Type: pfam
Location: 1634575 - 1635336 (-)
Gene ID: Rep_3012_c_1_1546
Type: pfam
Location: 1635343 - 1636035 (-)
Type: pfam
Location: 1635343 - 1636035 (-)
Gene ID: Rep_3012_c_1_1547
Type: CAZyme
Location: 1636192 - 1638759 (+)
Type: CAZyme
Location: 1636192 - 1638759 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
UBA11524
Species
UBA11524 sp000437595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3012_c_1_1545 | vegetarian > vegan | 1.18752 | 0.00307 |
| Rep_3012_c_1_1546 | vegetarian > vegan | 1.29863 | 0.00307 |
| Rep_3012_c_1_1547 | vegetarian > vegan | 1.15861 | 0.00307 |