Cluster: Rep_3012_CGC17
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3012
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3012_c_1 | Rep_3012_c_1_918 | 952871 | 953890 | + | 3.D.1.4.1 |
| pfam | Rep_3012_c_1 | Rep_3012_c_1_919 | 953894 | 954262 | + | Oxidored_q2 |
| TC | Rep_3012_c_1 | Rep_3012_c_1_920 | 954262 | 955767 | + | 3.D.1.4.1 |
| TC | Rep_3012_c_1 | Rep_3012_c_1_921 | 955781 | 956839 | + | 3.D.1.4.3 |
| pfam | Rep_3012_c_1 | Rep_3012_c_1_922 | 956815 | 957255 | + | Proton_antipo_M |
| pfam | Rep_3012_c_1 | Rep_3012_c_1_923 | 957269 | 958108 | + | Proton_antipo_N |
| TC | Rep_3012_c_1 | Rep_3012_c_1_924 | 958137 | 958742 | + | 3.D.1.4.3 |
| TC | Rep_3012_c_1 | Rep_3012_c_1_925 | 958761 | 959825 | + | 3.D.1.4.3 |
| NULL(UNKNOWN) | Rep_3012_c_1 | Rep_3012_c_1_926 | 959800 | 960810 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3012_c_1 | Rep_3012_c_1_927 | 961117 | 963576 | + | GT35 |
| CAZyme | Rep_3012_c_1 | Rep_3012_c_1_928 | 963703 | 964887 | + | GH13_39 |
Gene ID: Rep_3012_c_1_918
Type: TC
Location: 952871 - 953890 (+)
Type: TC
Location: 952871 - 953890 (+)
Gene ID: Rep_3012_c_1_919
Type: pfam
Location: 953894 - 954262 (+)
Type: pfam
Location: 953894 - 954262 (+)
Gene ID: Rep_3012_c_1_920
Type: TC
Location: 954262 - 955767 (+)
Type: TC
Location: 954262 - 955767 (+)
Gene ID: Rep_3012_c_1_921
Type: TC
Location: 955781 - 956839 (+)
Type: TC
Location: 955781 - 956839 (+)
Gene ID: Rep_3012_c_1_922
Type: pfam
Location: 956815 - 957255 (+)
Type: pfam
Location: 956815 - 957255 (+)
Gene ID: Rep_3012_c_1_923
Type: pfam
Location: 957269 - 958108 (+)
Type: pfam
Location: 957269 - 958108 (+)
Gene ID: Rep_3012_c_1_924
Type: TC
Location: 958137 - 958742 (+)
Type: TC
Location: 958137 - 958742 (+)
Gene ID: Rep_3012_c_1_925
Type: TC
Location: 958761 - 959825 (+)
Type: TC
Location: 958761 - 959825 (+)
Gene ID: Rep_3012_c_1_926
Type:
Location: 959800 - 960810 (+)
Type:
Location: 959800 - 960810 (+)
Gene ID: Rep_3012_c_1_927
Type: CAZyme
Location: 961117 - 963576 (+)
Type: CAZyme
Location: 961117 - 963576 (+)
Gene ID: Rep_3012_c_1_928
Type: CAZyme
Location: 963703 - 964887 (+)
Type: CAZyme
Location: 963703 - 964887 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
UBA11524
Species
UBA11524 sp000437595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3012_c_1_920 | vegetarian > vegan | 1.14256 | 0.00307 |
| Rep_3012_c_1_921 | vegetarian > vegan | 1.08765 | 0.00307 |
| Rep_3012_c_1_922 | vegetarian > vegan | 1.11858 | 0.00307 |
| Rep_3012_c_1_923 | vegetarian > vegan | 1.28977 | 0.00307 |
| Rep_3012_c_1_924 | vegetarian > vegan | 1.16464 | 0.00307 |
| Rep_3012_c_1_926 | vegetarian > vegan | 1.19468 | 0.00307 |
| Rep_3012_c_1_928 | vegetarian > vegan | 1.00881 | 0.00307 |