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Cluster: Rep_3012_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3012_c_1 Rep_3012_c_1_821 846196 847392 + GH53
TC Rep_3012_c_1 Rep_3012_c_1_822 847896 848630 - 3.D.6.1.2
TC Rep_3012_c_1 Rep_3012_c_1_823 848644 849234 - 3.D.6.1.2
TC Rep_3012_c_1 Rep_3012_c_1_824 849231 849857 - 3.D.6.1.2
TC Rep_3012_c_1 Rep_3012_c_1_825 849850 850788 - 3.D.6.1.2
TC Rep_3012_c_1 Rep_3012_c_1_826 850793 851488 - 3.D.6.1.2
TC Rep_3012_c_1 Rep_3012_c_1_827 851437 852183 - 3.D.6.1.2
Gene ID: Rep_3012_c_1_821
Type: CAZyme
Location: 846196 - 847392 (+)
Gene ID: Rep_3012_c_1_822
Type: TC
Location: 847896 - 848630 (-)
Gene ID: Rep_3012_c_1_823
Type: TC
Location: 848644 - 849234 (-)
Gene ID: Rep_3012_c_1_824
Type: TC
Location: 849231 - 849857 (-)
Gene ID: Rep_3012_c_1_825
Type: TC
Location: 849850 - 850788 (-)
Gene ID: Rep_3012_c_1_826
Type: TC
Location: 850793 - 851488 (-)
Gene ID: Rep_3012_c_1_827
Type: TC
Location: 851437 - 852183 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_3012_c_1_821 vegetarian > vegan 1.05180 0.00307
Rep_3012_c_1_822 vegetarian > vegan 1.20282 0.00307
Rep_3012_c_1_823 vegetarian > vegan 1.20929 0.00307
Rep_3012_c_1_824 vegetarian > vegan 1.17565 0.00307
Rep_3012_c_1_825 vegetarian > vegan 1.19613 0.00307
Rep_3012_c_1_826 vegetarian > vegan 1.32654 0.00307
Rep_3012_c_1_827 vegetarian > vegan 1.21575 0.00307

🧭 Explore Read Mapping of CGC

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