Cluster: Rep_3006_CGC6
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3006
- CGC Family ID: CGCFAM_00278
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3006_c_3 | Rep_3006_c_3_37 | 41310 | 43055 | - | 8.A.59.2.1 |
| TF | Rep_3006_c_3 | Rep_3006_c_3_38 | 43049 | 44071 | - | HTH_AraC | HTH_AraC |
| STP | Rep_3006_c_3 | Rep_3006_c_3_39 | 44307 | 45845 | - | SBP_bac_1 |
| TC | Rep_3006_c_3 | Rep_3006_c_3_40 | 45928 | 46797 | - | 3.A.1.1.29 |
| TC | Rep_3006_c_3 | Rep_3006_c_3_41 | 46812 | 47744 | - | 3.A.1.1.10 |
| STP | Rep_3006_c_3 | Rep_3006_c_3_42 | 48072 | 50363 | + | Fer4 |
| STP | Rep_3006_c_3 | Rep_3006_c_3_43 | 50432 | 51892 | - | SIS |
| CAZyme | Rep_3006_c_3 | Rep_3006_c_3_44 | 51889 | 54138 | - | GH2 |
Gene ID: Rep_3006_c_3_37
Type: TC
Location: 41310 - 43055 (-)
Type: TC
Location: 41310 - 43055 (-)
Gene ID: Rep_3006_c_3_38
Type: TF
Location: 43049 - 44071 (-)
Type: TF
Location: 43049 - 44071 (-)
Gene ID: Rep_3006_c_3_39
Type: STP
Location: 44307 - 45845 (-)
Type: STP
Location: 44307 - 45845 (-)
Gene ID: Rep_3006_c_3_40
Type: TC
Location: 45928 - 46797 (-)
Type: TC
Location: 45928 - 46797 (-)
Gene ID: Rep_3006_c_3_41
Type: TC
Location: 46812 - 47744 (-)
Type: TC
Location: 46812 - 47744 (-)
Gene ID: Rep_3006_c_3_42
Type: STP
Location: 48072 - 50363 (+)
Type: STP
Location: 48072 - 50363 (+)
Gene ID: Rep_3006_c_3_43
Type: STP
Location: 50432 - 51892 (-)
Type: STP
Location: 50432 - 51892 (-)
Gene ID: Rep_3006_c_3_44
Type: CAZyme
Location: 51889 - 54138 (-)
Type: CAZyme
Location: 51889 - 54138 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Alectryocaccomicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.