Cluster: Rep_3006_CGC55
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3006
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3006_c_94 | Rep_3006_c_94_2 | 1570 | 2556 | - | GT2 |
| STP | Rep_3006_c_94 | Rep_3006_c_94_3 | 2553 | 3173 | - | HD |
| NULL(UNKNOWN) | Rep_3006_c_94 | Rep_3006_c_94_4 | 3170 | 3814 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3006_c_94 | Rep_3006_c_94_5 | 4447 | 5370 | + | GH43_24 |
| TC | Rep_3006_c_94 | Rep_3006_c_94_6 | 5389 | 6666 | + | 3.A.1.106.14 |
| TC | Rep_3006_c_94 | Rep_3006_c_94_7 | 6663 | 7013 | + | 3.A.1.106.1 |
| TC | Rep_3006_c_94 | Rep_3006_c_94_8 | 7284 | 9503 | + | 3.A.1.201.17 |
Gene ID: Rep_3006_c_94_2
Type: CAZyme
Location: 1570 - 2556 (-)
Type: CAZyme
Location: 1570 - 2556 (-)
Gene ID: Rep_3006_c_94_3
Type: STP
Location: 2553 - 3173 (-)
Type: STP
Location: 2553 - 3173 (-)
Gene ID: Rep_3006_c_94_4
Type:
Location: 3170 - 3814 (-)
Type:
Location: 3170 - 3814 (-)
Gene ID: Rep_3006_c_94_5
Type: CAZyme
Location: 4447 - 5370 (+)
Type: CAZyme
Location: 4447 - 5370 (+)
Gene ID: Rep_3006_c_94_6
Type: TC
Location: 5389 - 6666 (+)
Type: TC
Location: 5389 - 6666 (+)
Gene ID: Rep_3006_c_94_7
Type: TC
Location: 6663 - 7013 (+)
Type: TC
Location: 6663 - 7013 (+)
Gene ID: Rep_3006_c_94_8
Type: TC
Location: 7284 - 9503 (+)
Type: TC
Location: 7284 - 9503 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Alectryocaccomicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.