Cluster: Rep_3006_CGC50
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3006
- CGC Family ID: CGCFAM_00228
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3006_c_78 | Rep_3006_c_78_2 | 1471 | 2403 | + | 3.A.1.1.10 |
| TC | Rep_3006_c_78 | Rep_3006_c_78_3 | 2418 | 3296 | + | 3.A.1.1.29 |
| CAZyme | Rep_3006_c_78 | Rep_3006_c_78_4 | 3303 | 4334 | + | GH137 |
| STP | Rep_3006_c_78 | Rep_3006_c_78_5 | 4455 | 5957 | + | SBP_bac_1 |
| TF | Rep_3006_c_78 | Rep_3006_c_78_6 | 6039 | 6788 | + | HTH_AraC | HTH_AraC |
| TC | Rep_3006_c_78 | Rep_3006_c_78_7 | 6799 | 8568 | + | 9.B.33.1.1 |
Gene ID: Rep_3006_c_78_2
Type: TC
Location: 1471 - 2403 (+)
Type: TC
Location: 1471 - 2403 (+)
Gene ID: Rep_3006_c_78_3
Type: TC
Location: 2418 - 3296 (+)
Type: TC
Location: 2418 - 3296 (+)
Gene ID: Rep_3006_c_78_4
Type: CAZyme
Location: 3303 - 4334 (+)
Type: CAZyme
Location: 3303 - 4334 (+)
Gene ID: Rep_3006_c_78_5
Type: STP
Location: 4455 - 5957 (+)
Type: STP
Location: 4455 - 5957 (+)
Gene ID: Rep_3006_c_78_6
Type: TF
Location: 6039 - 6788 (+)
Type: TF
Location: 6039 - 6788 (+)
Gene ID: Rep_3006_c_78_7
Type: TC
Location: 6799 - 8568 (+)
Type: TC
Location: 6799 - 8568 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Alectryocaccomicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.