Cluster: Rep_3006_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3006
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3006_c_3 | Rep_3006_c_3_11 | 11462 | 12457 | - | GH25 |
| NULL(UNKNOWN) | Rep_3006_c_3 | Rep_3006_c_3_12 | 12623 | 13228 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3006_c_3 | Rep_3006_c_3_13 | 13243 | 15750 | - | GH2 |
| pfam | Rep_3006_c_3 | Rep_3006_c_3_14 | 15841 | 16578 | + | ABC_tran | AAA_21 | AAA_23 |
| NULL(UNKNOWN) | Rep_3006_c_3 | Rep_3006_c_3_15 | 16582 | 16893 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3006_c_3 | Rep_3006_c_3_16 | 16924 | 18369 | - | 2.A.66.1.28 |
Gene ID: Rep_3006_c_3_11
Type: CAZyme
Location: 11462 - 12457 (-)
Type: CAZyme
Location: 11462 - 12457 (-)
Gene ID: Rep_3006_c_3_12
Type:
Location: 12623 - 13228 (+)
Type:
Location: 12623 - 13228 (+)
Gene ID: Rep_3006_c_3_13
Type: CAZyme
Location: 13243 - 15750 (-)
Type: CAZyme
Location: 13243 - 15750 (-)
Gene ID: Rep_3006_c_3_14
Type: pfam
Location: 15841 - 16578 (+)
Type: pfam
Location: 15841 - 16578 (+)
Gene ID: Rep_3006_c_3_15
Type:
Location: 16582 - 16893 (-)
Type:
Location: 16582 - 16893 (-)
Gene ID: Rep_3006_c_3_16
Type: TC
Location: 16924 - 18369 (-)
Type: TC
Location: 16924 - 18369 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Alectryocaccomicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.