Cluster: Rep_3006_CGC47
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3006
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3006_c_68 | Rep_3006_c_68_3 | 4241 | 5959 | + | 3.A.1.135.5 |
| pfam | Rep_3006_c_68 | Rep_3006_c_68_4 | 6174 | 6689 | + | NusG |
| STP | Rep_3006_c_68 | Rep_3006_c_68_5 | 6811 | 8340 | - | AAA |
| CAZyme | Rep_3006_c_68 | Rep_3006_c_68_6 | 8362 | 12156 | - | GT39 |
| pfam | Rep_3006_c_68 | Rep_3006_c_68_7 | 12183 | 12539 | - | UPF0102 | NERD |
| TC | Rep_3006_c_68 | Rep_3006_c_68_8 | 12679 | 13590 | - | 3.A.1.24.6 |
| TC | Rep_3006_c_68 | Rep_3006_c_68_9 | 13618 | 14295 | - | 3.A.1.24.6 |
| TC | Rep_3006_c_68 | Rep_3006_c_68_10 | 14288 | 15322 | - | 3.A.1.24.3 |
Gene ID: Rep_3006_c_68_3
Type: TC
Location: 4241 - 5959 (+)
Type: TC
Location: 4241 - 5959 (+)
Gene ID: Rep_3006_c_68_4
Type: pfam
Location: 6174 - 6689 (+)
Type: pfam
Location: 6174 - 6689 (+)
Gene ID: Rep_3006_c_68_5
Type: STP
Location: 6811 - 8340 (-)
Type: STP
Location: 6811 - 8340 (-)
Gene ID: Rep_3006_c_68_6
Type: CAZyme
Location: 8362 - 12156 (-)
Type: CAZyme
Location: 8362 - 12156 (-)
Gene ID: Rep_3006_c_68_7
Type: pfam
Location: 12183 - 12539 (-)
Type: pfam
Location: 12183 - 12539 (-)
Gene ID: Rep_3006_c_68_8
Type: TC
Location: 12679 - 13590 (-)
Type: TC
Location: 12679 - 13590 (-)
Gene ID: Rep_3006_c_68_9
Type: TC
Location: 13618 - 14295 (-)
Type: TC
Location: 13618 - 14295 (-)
Gene ID: Rep_3006_c_68_10
Type: TC
Location: 14288 - 15322 (-)
Type: TC
Location: 14288 - 15322 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Alectryocaccomicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.