Cluster: Rep_3006_CGC42
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3006
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3006_c_52 | Rep_3006_c_52_1 | 357 | 1370 | + | GH18 |
| TC | Rep_3006_c_52 | Rep_3006_c_52_2 | 1560 | 2924 | + | 2.A.66.1.28 |
| CAZyme | Rep_3006_c_52 | Rep_3006_c_52_3 | 3082 | 4743 | + | GH2 |
| peptidase | Rep_3006_c_52 | Rep_3006_c_52_4 | 4886 | 5581 | + | M15.UPB |
| NULL(UNKNOWN) | Rep_3006_c_52 | Rep_3006_c_52_5 | 5669 | 5788 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3006_c_52 | Rep_3006_c_52_6 | 5781 | 6233 | + | 9.A.11.1.1 |
| pfam | Rep_3006_c_52 | Rep_3006_c_52_7 | 6233 | 7237 | + | SpoVAD |
| TC | Rep_3006_c_52 | Rep_3006_c_52_8 | 7238 | 7606 | + | 9.A.11.1.1 |
Gene ID: Rep_3006_c_52_1
Type: CAZyme
Location: 357 - 1370 (+)
Type: CAZyme
Location: 357 - 1370 (+)
Gene ID: Rep_3006_c_52_2
Type: TC
Location: 1560 - 2924 (+)
Type: TC
Location: 1560 - 2924 (+)
Gene ID: Rep_3006_c_52_3
Type: CAZyme
Location: 3082 - 4743 (+)
Type: CAZyme
Location: 3082 - 4743 (+)
Gene ID: Rep_3006_c_52_4
Type: peptidase
Location: 4886 - 5581 (+)
Type: peptidase
Location: 4886 - 5581 (+)
Gene ID: Rep_3006_c_52_5
Type:
Location: 5669 - 5788 (+)
Type:
Location: 5669 - 5788 (+)
Gene ID: Rep_3006_c_52_6
Type: TC
Location: 5781 - 6233 (+)
Type: TC
Location: 5781 - 6233 (+)
Gene ID: Rep_3006_c_52_7
Type: pfam
Location: 6233 - 7237 (+)
Type: pfam
Location: 6233 - 7237 (+)
Gene ID: Rep_3006_c_52_8
Type: TC
Location: 7238 - 7606 (+)
Type: TC
Location: 7238 - 7606 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Alectryocaccomicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.