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Cluster: Rep_3006_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3006_c_21 Rep_3006_c_21_15 14947 16356 + GT2
TC Rep_3006_c_21 Rep_3006_c_21_16 16581 17045 + 3.D.1.5.1
STP Rep_3006_c_21 Rep_3006_c_21_17 17064 17597 + HATPase_c
NULL(UNKNOWN) Rep_3006_c_21 Rep_3006_c_21_18 17594 17962 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3006_c_21 Rep_3006_c_21_19 17978 19774 + 3.D.1.5.1
TC Rep_3006_c_21 Rep_3006_c_21_20 19791 21536 + 3.D.1.5.1
STP Rep_3006_c_21 Rep_3006_c_21_21 21817 22944 - Peripla_BP_3
TC Rep_3006_c_21 Rep_3006_c_21_22 23164 24108 + 3.A.1.1.10
TC Rep_3006_c_21 Rep_3006_c_21_23 24129 25031 + 3.A.1.1.10
TC Rep_3006_c_21 Rep_3006_c_21_24 25079 26644 + 3.A.1.1.10
CAZyme Rep_3006_c_21 Rep_3006_c_21_25 26711 28852 + GH106
Gene ID: Rep_3006_c_21_15
Type: CAZyme
Location: 14947 - 16356 (+)
Gene ID: Rep_3006_c_21_16
Type: TC
Location: 16581 - 17045 (+)
Gene ID: Rep_3006_c_21_17
Type: STP
Location: 17064 - 17597 (+)
Gene ID: Rep_3006_c_21_18
Type:
Location: 17594 - 17962 (+)
Gene ID: Rep_3006_c_21_19
Type: TC
Location: 17978 - 19774 (+)
Gene ID: Rep_3006_c_21_20
Type: TC
Location: 19791 - 21536 (+)
Gene ID: Rep_3006_c_21_21
Type: STP
Location: 21817 - 22944 (-)
Gene ID: Rep_3006_c_21_22
Type: TC
Location: 23164 - 24108 (+)
Gene ID: Rep_3006_c_21_23
Type: TC
Location: 24129 - 25031 (+)
Gene ID: Rep_3006_c_21_24
Type: TC
Location: 25079 - 26644 (+)
Gene ID: Rep_3006_c_21_25
Type: CAZyme
Location: 26711 - 28852 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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