Cluster: Rep_3006_CGC12
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3006
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3006_c_7 | Rep_3006_c_7_49 | 41494 | 42222 | - | 3.A.1.4.6 |
| TC | Rep_3006_c_7 | Rep_3006_c_7_50 | 42359 | 44260 | - | 3.A.3.6.10 |
| TC | Rep_3006_c_7 | Rep_3006_c_7_51 | 44294 | 44512 | - | 3.A.3.6.10 |
| TF | Rep_3006_c_7 | Rep_3006_c_7_52 | 44534 | 44896 | - | HTH_5 |
| NULL(UNKNOWN) | Rep_3006_c_7 | Rep_3006_c_7_53 | 45044 | 45466 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3006_c_7 | Rep_3006_c_7_54 | 45478 | 46659 | - | CE9 |
| STP | Rep_3006_c_7 | Rep_3006_c_7_55 | 47040 | 47663 | + | TetR_N |
| CAZyme | Rep_3006_c_7 | Rep_3006_c_7_56 | 47666 | 48757 | + | GH109 |
Gene ID: Rep_3006_c_7_49
Type: TC
Location: 41494 - 42222 (-)
Type: TC
Location: 41494 - 42222 (-)
Gene ID: Rep_3006_c_7_50
Type: TC
Location: 42359 - 44260 (-)
Type: TC
Location: 42359 - 44260 (-)
Gene ID: Rep_3006_c_7_51
Type: TC
Location: 44294 - 44512 (-)
Type: TC
Location: 44294 - 44512 (-)
Gene ID: Rep_3006_c_7_52
Type: TF
Location: 44534 - 44896 (-)
Type: TF
Location: 44534 - 44896 (-)
Gene ID: Rep_3006_c_7_53
Type:
Location: 45044 - 45466 (-)
Type:
Location: 45044 - 45466 (-)
Gene ID: Rep_3006_c_7_54
Type: CAZyme
Location: 45478 - 46659 (-)
Type: CAZyme
Location: 45478 - 46659 (-)
Gene ID: Rep_3006_c_7_55
Type: STP
Location: 47040 - 47663 (+)
Type: STP
Location: 47040 - 47663 (+)
Gene ID: Rep_3006_c_7_56
Type: CAZyme
Location: 47666 - 48757 (+)
Type: CAZyme
Location: 47666 - 48757 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Alectryocaccomicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.