Cluster: Rep_3005_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3005
- CGC Family ID: CGCFAM_00228
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3005_c_2 | Rep_3005_c_2_65 | 84113 | 85039 | + | 3.A.1.1.10 |
| TC | Rep_3005_c_2 | Rep_3005_c_2_66 | 85066 | 85956 | + | 3.A.1.1.29 |
| STP | Rep_3005_c_2 | Rep_3005_c_2_67 | 86010 | 87596 | + | SBP_bac_1 |
| TF | Rep_3005_c_2 | Rep_3005_c_2_68 | 87720 | 89906 | + | HTH_AraC |
| CAZyme | Rep_3005_c_2 | Rep_3005_c_2_69 | 89941 | 92064 | + | GH139 |
| peptidase | Rep_3005_c_2 | Rep_3005_c_2_70 | 92166 | 94586 | - | C40.UPW |
| TC | Rep_3005_c_2 | Rep_3005_c_2_71 | 94792 | 95874 | - | 9.A.23.1.1 |
Gene ID: Rep_3005_c_2_65
Type: TC
Location: 84113 - 85039 (+)
Type: TC
Location: 84113 - 85039 (+)
Gene ID: Rep_3005_c_2_66
Type: TC
Location: 85066 - 85956 (+)
Type: TC
Location: 85066 - 85956 (+)
Gene ID: Rep_3005_c_2_67
Type: STP
Location: 86010 - 87596 (+)
Type: STP
Location: 86010 - 87596 (+)
Gene ID: Rep_3005_c_2_68
Type: TF
Location: 87720 - 89906 (+)
Type: TF
Location: 87720 - 89906 (+)
Gene ID: Rep_3005_c_2_69
Type: CAZyme
Location: 89941 - 92064 (+)
Type: CAZyme
Location: 89941 - 92064 (+)
Gene ID: Rep_3005_c_2_70
Type: peptidase
Location: 92166 - 94586 (-)
Type: peptidase
Location: 92166 - 94586 (-)
Gene ID: Rep_3005_c_2_71
Type: TC
Location: 94792 - 95874 (-)
Type: TC
Location: 94792 - 95874 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Alectryocaccomicrobium
Species
Alectryocaccomicrobium faecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.