Cluster: Rep_3005_CGC43
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3005
- CGC Family ID: CGCFAM_01429
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3005_c_78 | Rep_3005_c_78_12 | 10159 | 12024 | + | GH127 |
| TF | Rep_3005_c_78 | Rep_3005_c_78_13 | 12437 | 13117 | + | Trans_reg_C |
| TC | Rep_3005_c_78 | Rep_3005_c_78_14 | 13114 | 14208 | + | 2.A.21.9.1 |
Gene ID: Rep_3005_c_78_12
Type: CAZyme
Location: 10159 - 12024 (+)
Type: CAZyme
Location: 10159 - 12024 (+)
Gene ID: Rep_3005_c_78_13
Type: TF
Location: 12437 - 13117 (+)
Type: TF
Location: 12437 - 13117 (+)
Gene ID: Rep_3005_c_78_14
Type: TC
Location: 13114 - 14208 (+)
Type: TC
Location: 13114 - 14208 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Alectryocaccomicrobium
Species
Alectryocaccomicrobium faecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3005_c_78_14 | vegetarian > vegan | 13.63383 | 0.01867 |