Cluster: Rep_3005_CGC40
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3005
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3005_c_67 | Rep_3005_c_67_10 | 12749 | 13666 | - | 3.A.1.1.29 |
| TC | Rep_3005_c_67 | Rep_3005_c_67_11 | 13694 | 14644 | - | 3.A.1.1.10 |
| TF | Rep_3005_c_67 | Rep_3005_c_67_12 | 14977 | 15828 | + | HTH_AraC |
| CAZyme | Rep_3005_c_67 | Rep_3005_c_67_13 | 15900 | 16991 | - | GH179 |
Gene ID: Rep_3005_c_67_10
Type: TC
Location: 12749 - 13666 (-)
Type: TC
Location: 12749 - 13666 (-)
Gene ID: Rep_3005_c_67_11
Type: TC
Location: 13694 - 14644 (-)
Type: TC
Location: 13694 - 14644 (-)
Gene ID: Rep_3005_c_67_12
Type: TF
Location: 14977 - 15828 (+)
Type: TF
Location: 14977 - 15828 (+)
Gene ID: Rep_3005_c_67_13
Type: CAZyme
Location: 15900 - 16991 (-)
Type: CAZyme
Location: 15900 - 16991 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Alectryocaccomicrobium
Species
Alectryocaccomicrobium faecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.