Cluster: Rep_3005_CGC36
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3005
- CGC Family ID: CGCFAM_00089
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3005_c_42 | Rep_3005_c_42_13 | 18361 | 19335 | - | GH29 |
| pfam | Rep_3005_c_42 | Rep_3005_c_42_14 | 19551 | 21713 | + | S1 | Tex_N | HHH_3 | Tex_YqgF | HHH_9 | Tex_central_region | S1_RRP5 |
| CAZyme | Rep_3005_c_42 | Rep_3005_c_42_15 | 21819 | 24881 | + | GH38 |
| TC | Rep_3005_c_42 | Rep_3005_c_42_16 | 24995 | 25852 | - | 3.A.1.1.27 |
| TC | Rep_3005_c_42 | Rep_3005_c_42_17 | 25849 | 27243 | - | 3.A.1.1.27 |
Gene ID: Rep_3005_c_42_13
Type: CAZyme
Location: 18361 - 19335 (-)
Type: CAZyme
Location: 18361 - 19335 (-)
Gene ID: Rep_3005_c_42_14
Type: pfam
Location: 19551 - 21713 (+)
Type: pfam
Location: 19551 - 21713 (+)
Gene ID: Rep_3005_c_42_15
Type: CAZyme
Location: 21819 - 24881 (+)
Type: CAZyme
Location: 21819 - 24881 (+)
Gene ID: Rep_3005_c_42_16
Type: TC
Location: 24995 - 25852 (-)
Type: TC
Location: 24995 - 25852 (-)
Gene ID: Rep_3005_c_42_17
Type: TC
Location: 25849 - 27243 (-)
Type: TC
Location: 25849 - 27243 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Alectryocaccomicrobium
Species
Alectryocaccomicrobium faecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.