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Cluster: Rep_3005_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3005_c_41 Rep_3005_c_41_10 10719 12569 + 3.A.1.210.11
TC Rep_3005_c_41 Rep_3005_c_41_11 12544 14442 + 3.A.1.111.2
pfam Rep_3005_c_41 Rep_3005_c_41_12 14504 15505 + Macro
NULL(UNKNOWN) Rep_3005_c_41 Rep_3005_c_41_13 15705 16358 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_3005_c_41 Rep_3005_c_41_14 17214 18989 - GH181
TC Rep_3005_c_41 Rep_3005_c_41_15 18986 19867 - 3.A.1.1.29
TC Rep_3005_c_41 Rep_3005_c_41_16 19896 20819 - 3.A.1.1.10
TC Rep_3005_c_41 Rep_3005_c_41_17 20898 22439 - 3.A.1.1.10
Gene ID: Rep_3005_c_41_10
Type: TC
Location: 10719 - 12569 (+)
Gene ID: Rep_3005_c_41_11
Type: TC
Location: 12544 - 14442 (+)
Gene ID: Rep_3005_c_41_12
Type: pfam
Location: 14504 - 15505 (+)
Gene ID: Rep_3005_c_41_13
Type:
Location: 15705 - 16358 (+)
Gene ID: Rep_3005_c_41_14
Type: CAZyme
Location: 17214 - 18989 (-)
Gene ID: Rep_3005_c_41_15
Type: TC
Location: 18986 - 19867 (-)
Gene ID: Rep_3005_c_41_16
Type: TC
Location: 19896 - 20819 (-)
Gene ID: Rep_3005_c_41_17
Type: TC
Location: 20898 - 22439 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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