Cluster: Rep_3005_CGC24
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3005
- CGC Family ID: CGCFAM_00223
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3005_c_23 | Rep_3005_c_23_11 | 15820 | 16728 | - | 3.A.1.1.29 |
| TC | Rep_3005_c_23 | Rep_3005_c_23_12 | 16747 | 17688 | - | 3.A.1.1.29 |
| TF | Rep_3005_c_23 | Rep_3005_c_23_13 | 17871 | 19109 | + | HTH_AraC |
| TC | Rep_3005_c_23 | Rep_3005_c_23_14 | 19111 | 20889 | + | 8.A.59.2.1 |
| CAZyme | Rep_3005_c_23 | Rep_3005_c_23_15 | 21019 | 23136 | - | GH42 |
| TC | Rep_3005_c_23 | Rep_3005_c_23_16 | 23508 | 24365 | + | 3.A.1.1.10 |
| TC | Rep_3005_c_23 | Rep_3005_c_23_17 | 24379 | 25287 | + | 3.A.1.1.10 |
Gene ID: Rep_3005_c_23_11
Type: TC
Location: 15820 - 16728 (-)
Type: TC
Location: 15820 - 16728 (-)
Gene ID: Rep_3005_c_23_12
Type: TC
Location: 16747 - 17688 (-)
Type: TC
Location: 16747 - 17688 (-)
Gene ID: Rep_3005_c_23_13
Type: TF
Location: 17871 - 19109 (+)
Type: TF
Location: 17871 - 19109 (+)
Gene ID: Rep_3005_c_23_14
Type: TC
Location: 19111 - 20889 (+)
Type: TC
Location: 19111 - 20889 (+)
Gene ID: Rep_3005_c_23_15
Type: CAZyme
Location: 21019 - 23136 (-)
Type: CAZyme
Location: 21019 - 23136 (-)
Gene ID: Rep_3005_c_23_16
Type: TC
Location: 23508 - 24365 (+)
Type: TC
Location: 23508 - 24365 (+)
Gene ID: Rep_3005_c_23_17
Type: TC
Location: 24379 - 25287 (+)
Type: TC
Location: 24379 - 25287 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Alectryocaccomicrobium
Species
Alectryocaccomicrobium faecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.