dbCAN Logo

Cluster: Rep_3005_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3005_c_21 Rep_3005_c_21_11 10722 11720 + 3.A.1.14.16
pfam Rep_3005_c_21 Rep_3005_c_21_12 11841 12392 + DUF308 | DUF308
CAZyme Rep_3005_c_21 Rep_3005_c_21_13 12503 13603 + GT28
pfam Rep_3005_c_21 Rep_3005_c_21_14 13616 14806 + AlkZ-like
pfam Rep_3005_c_21 Rep_3005_c_21_15 14904 16061 - tRNA-synt_2c | tRNA_SAD
TC Rep_3005_c_21 Rep_3005_c_21_16 16068 16637 - 2.A.107.1.2
TC Rep_3005_c_21 Rep_3005_c_21_17 16638 17606 - 3.A.1.2.17
pfam Rep_3005_c_21 Rep_3005_c_21_18 17603 18691 - BPD_transp_2
TC Rep_3005_c_21 Rep_3005_c_21_19 18684 20234 - 3.A.1.2.10
TC Rep_3005_c_21 Rep_3005_c_21_20 20353 21264 - 1.A.35.3.2
TC Rep_3005_c_21 Rep_3005_c_21_21 21342 22562 - 2.A.37.3.3
Gene ID: Rep_3005_c_21_11
Type: TC
Location: 10722 - 11720 (+)
Gene ID: Rep_3005_c_21_12
Type: pfam
Location: 11841 - 12392 (+)
Gene ID: Rep_3005_c_21_13
Type: CAZyme
Location: 12503 - 13603 (+)
Gene ID: Rep_3005_c_21_14
Type: pfam
Location: 13616 - 14806 (+)
Gene ID: Rep_3005_c_21_15
Type: pfam
Location: 14904 - 16061 (-)
Gene ID: Rep_3005_c_21_16
Type: TC
Location: 16068 - 16637 (-)
Gene ID: Rep_3005_c_21_17
Type: TC
Location: 16638 - 17606 (-)
Gene ID: Rep_3005_c_21_18
Type: pfam
Location: 17603 - 18691 (-)
Gene ID: Rep_3005_c_21_19
Type: TC
Location: 18684 - 20234 (-)
Gene ID: Rep_3005_c_21_20
Type: TC
Location: 20353 - 21264 (-)
Gene ID: Rep_3005_c_21_21
Type: TC
Location: 21342 - 22562 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List