Cluster: Rep_3005_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3005
- CGC Family ID: CGCFAM_10613
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3005_c_0 | Rep_3005_c_0_104 | 121714 | 123159 | + | 2.A.66.1.28 |
| NULL(UNKNOWN) | Rep_3005_c_0 | Rep_3005_c_0_105 | 123190 | 123501 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3005_c_0 | Rep_3005_c_0_106 | 123505 | 124242 | - | ABC_tran | AAA_21 | AAA_23 |
| CAZyme | Rep_3005_c_0 | Rep_3005_c_0_107 | 124333 | 126840 | + | GH2 |
| NULL(UNKNOWN) | Rep_3005_c_0 | Rep_3005_c_0_108 | 126855 | 127460 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3005_c_0 | Rep_3005_c_0_109 | 127625 | 128611 | + | GH25 |
Gene ID: Rep_3005_c_0_104
Type: TC
Location: 121714 - 123159 (+)
Type: TC
Location: 121714 - 123159 (+)
Gene ID: Rep_3005_c_0_105
Type:
Location: 123190 - 123501 (+)
Type:
Location: 123190 - 123501 (+)
Gene ID: Rep_3005_c_0_106
Type: pfam
Location: 123505 - 124242 (-)
Type: pfam
Location: 123505 - 124242 (-)
Gene ID: Rep_3005_c_0_107
Type: CAZyme
Location: 124333 - 126840 (+)
Type: CAZyme
Location: 124333 - 126840 (+)
Gene ID: Rep_3005_c_0_108
Type:
Location: 126855 - 127460 (-)
Type:
Location: 126855 - 127460 (-)
Gene ID: Rep_3005_c_0_109
Type: CAZyme
Location: 127625 - 128611 (+)
Type: CAZyme
Location: 127625 - 128611 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Alectryocaccomicrobium
Species
Alectryocaccomicrobium faecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.