Cluster: Rep_3005_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3005
- CGC Family ID: CGCFAM_01040
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3005_c_16 | Rep_3005_c_16_1 | 642 | 3134 | + | GH106 |
| TF | Rep_3005_c_16 | Rep_3005_c_16_2 | 3172 | 4677 | + | HTH_AraC | HTH_AraC |
| TC | Rep_3005_c_16 | Rep_3005_c_16_3 | 4679 | 6349 | + | 8.A.59.2.1 |
| TC | Rep_3005_c_16 | Rep_3005_c_16_4 | 6456 | 8024 | + | 3.A.1.1.9 |
| TC | Rep_3005_c_16 | Rep_3005_c_16_5 | 8178 | 9068 | + | 3.A.1.1.9 |
| TC | Rep_3005_c_16 | Rep_3005_c_16_6 | 9085 | 9975 | + | 3.A.1.1.9 |
| CAZyme | Rep_3005_c_16 | Rep_3005_c_16_7 | 9983 | 12601 | + | GH106 |
Gene ID: Rep_3005_c_16_1
Type: CAZyme
Location: 642 - 3134 (+)
Type: CAZyme
Location: 642 - 3134 (+)
Gene ID: Rep_3005_c_16_2
Type: TF
Location: 3172 - 4677 (+)
Type: TF
Location: 3172 - 4677 (+)
Gene ID: Rep_3005_c_16_3
Type: TC
Location: 4679 - 6349 (+)
Type: TC
Location: 4679 - 6349 (+)
Gene ID: Rep_3005_c_16_4
Type: TC
Location: 6456 - 8024 (+)
Type: TC
Location: 6456 - 8024 (+)
Gene ID: Rep_3005_c_16_5
Type: TC
Location: 8178 - 9068 (+)
Type: TC
Location: 8178 - 9068 (+)
Gene ID: Rep_3005_c_16_6
Type: TC
Location: 9085 - 9975 (+)
Type: TC
Location: 9085 - 9975 (+)
Gene ID: Rep_3005_c_16_7
Type: CAZyme
Location: 9983 - 12601 (+)
Type: CAZyme
Location: 9983 - 12601 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Alectryocaccomicrobium
Species
Alectryocaccomicrobium faecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.