Cluster: Rep_3005_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_3005
- CGC Family ID: CGCFAM_02009
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3005_c_10 | Rep_3005_c_10_16 | 17833 | 18783 | + | 3.A.1.1.10 |
| TC | Rep_3005_c_10 | Rep_3005_c_10_17 | 18798 | 19694 | + | 3.A.1.1.29 |
| STP | Rep_3005_c_10 | Rep_3005_c_10_18 | 19836 | 21311 | + | SBP_bac_1 |
| CAZyme | Rep_3005_c_10 | Rep_3005_c_10_19 | 21432 | 23129 | + | GH13_31 |
| CAZyme | Rep_3005_c_10 | Rep_3005_c_10_20 | 23116 | 23946 | + | GH16 |
| CAZyme | Rep_3005_c_10 | Rep_3005_c_10_21 | 24050 | 25363 | + | GH125 |
Gene ID: Rep_3005_c_10_16
Type: TC
Location: 17833 - 18783 (+)
Type: TC
Location: 17833 - 18783 (+)
Gene ID: Rep_3005_c_10_17
Type: TC
Location: 18798 - 19694 (+)
Type: TC
Location: 18798 - 19694 (+)
Gene ID: Rep_3005_c_10_18
Type: STP
Location: 19836 - 21311 (+)
Type: STP
Location: 19836 - 21311 (+)
Gene ID: Rep_3005_c_10_19
Type: CAZyme
Location: 21432 - 23129 (+)
Type: CAZyme
Location: 21432 - 23129 (+)
Gene ID: Rep_3005_c_10_20
Type: CAZyme
Location: 23116 - 23946 (+)
Type: CAZyme
Location: 23116 - 23946 (+)
Gene ID: Rep_3005_c_10_21
Type: CAZyme
Location: 24050 - 25363 (+)
Type: CAZyme
Location: 24050 - 25363 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Alectryocaccomicrobium
Species
Alectryocaccomicrobium faecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.