Cluster: Rep_3005_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3005
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3005_c_9 | Rep_3005_c_9_37 | 41270 | 42403 | - | GT28 |
| TC | Rep_3005_c_9 | Rep_3005_c_9_38 | 42689 | 44095 | + | 2.A.66.1.28 |
| TF | Rep_3005_c_9 | Rep_3005_c_9_39 | 44242 | 44628 | + | GntR |
| TC | Rep_3005_c_9 | Rep_3005_c_9_40 | 44618 | 45478 | + | 3.A.1.149.1 |
| pfam | Rep_3005_c_9 | Rep_3005_c_9_41 | 45471 | 46121 | + | ABC2_membrane_5 |
| STP | Rep_3005_c_9 | Rep_3005_c_9_42 | 46564 | 47202 | + | TetR_N |
| TC | Rep_3005_c_9 | Rep_3005_c_9_43 | 47294 | 48532 | + | 2.A.1.62.1 |
Gene ID: Rep_3005_c_9_37
Type: CAZyme
Location: 41270 - 42403 (-)
Type: CAZyme
Location: 41270 - 42403 (-)
Gene ID: Rep_3005_c_9_38
Type: TC
Location: 42689 - 44095 (+)
Type: TC
Location: 42689 - 44095 (+)
Gene ID: Rep_3005_c_9_39
Type: TF
Location: 44242 - 44628 (+)
Type: TF
Location: 44242 - 44628 (+)
Gene ID: Rep_3005_c_9_40
Type: TC
Location: 44618 - 45478 (+)
Type: TC
Location: 44618 - 45478 (+)
Gene ID: Rep_3005_c_9_41
Type: pfam
Location: 45471 - 46121 (+)
Type: pfam
Location: 45471 - 46121 (+)
Gene ID: Rep_3005_c_9_42
Type: STP
Location: 46564 - 47202 (+)
Type: STP
Location: 46564 - 47202 (+)
Gene ID: Rep_3005_c_9_43
Type: TC
Location: 47294 - 48532 (+)
Type: TC
Location: 47294 - 48532 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Alectryocaccomicrobium
Species
Alectryocaccomicrobium faecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.