Cluster: Rep_3005_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3005
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3005_c_0 | Rep_3005_c_0_10 | 14130 | 17054 | + | GH106 |
| TC | Rep_3005_c_0 | Rep_3005_c_0_11 | 17228 | 19108 | + | 3.A.3.6.16 |
| NULL(UNKNOWN) | Rep_3005_c_0 | Rep_3005_c_0_12 | 19208 | 20293 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3005_c_0 | Rep_3005_c_0_13 | 20527 | 22161 | - | SBP_bac_1 |
| TC | Rep_3005_c_0 | Rep_3005_c_0_14 | 22216 | 23139 | - | 3.A.1.1.10 |
| TC | Rep_3005_c_0 | Rep_3005_c_0_15 | 23155 | 24087 | - | 3.A.1.1.10 |
Gene ID: Rep_3005_c_0_10
Type: CAZyme
Location: 14130 - 17054 (+)
Type: CAZyme
Location: 14130 - 17054 (+)
Gene ID: Rep_3005_c_0_11
Type: TC
Location: 17228 - 19108 (+)
Type: TC
Location: 17228 - 19108 (+)
Gene ID: Rep_3005_c_0_12
Type:
Location: 19208 - 20293 (+)
Type:
Location: 19208 - 20293 (+)
Gene ID: Rep_3005_c_0_13
Type: pfam
Location: 20527 - 22161 (-)
Type: pfam
Location: 20527 - 22161 (-)
Gene ID: Rep_3005_c_0_14
Type: TC
Location: 22216 - 23139 (-)
Type: TC
Location: 22216 - 23139 (-)
Gene ID: Rep_3005_c_0_15
Type: TC
Location: 23155 - 24087 (-)
Type: TC
Location: 23155 - 24087 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Alectryocaccomicrobium
Species
Alectryocaccomicrobium faecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.