Cluster: Rep_2_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2
- CGC Family ID: CGCFAM_01011
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2_c_2 | Rep_2_c_2_144 | 153948 | 154508 | - | 2.A.96.1.1 |
| pfam | Rep_2_c_2 | Rep_2_c_2_145 | 154761 | 156317 | + | AICARFT_IMPCHas | MGS |
| CAZyme | Rep_2_c_2 | Rep_2_c_2_146 | 156365 | 157246 | + | GT2 |
Gene ID: Rep_2_c_2_144
Type: TC
Location: 153948 - 154508 (-)
Type: TC
Location: 153948 - 154508 (-)
Gene ID: Rep_2_c_2_145
Type: pfam
Location: 154761 - 156317 (+)
Type: pfam
Location: 154761 - 156317 (+)
Gene ID: Rep_2_c_2_146
Type: CAZyme
Location: 156365 - 157246 (+)
Type: CAZyme
Location: 156365 - 157246 (+)
Taxonomic Lineage
Domain
Archaea
Phylum
Thermoplasmatota
Class
Thermoplasmata
Order
Methanomassiliicoccales
Family
Methanomassiliicoccaceae
Genus
Methanomassiliicoccus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.