Cluster: Rep_2_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2_c_0 | Rep_2_c_0_112 | 137507 | 138913 | - | 2.A.1.1.106 |
| pfam | Rep_2_c_0 | Rep_2_c_0_113 | 138891 | 139634 | - | Trehalose_PPase |
| CAZyme | Rep_2_c_0 | Rep_2_c_0_114 | 139600 | 141000 | - | GT20 |
Gene ID: Rep_2_c_0_112
Type: TC
Location: 137507 - 138913 (-)
Type: TC
Location: 137507 - 138913 (-)
Gene ID: Rep_2_c_0_113
Type: pfam
Location: 138891 - 139634 (-)
Type: pfam
Location: 138891 - 139634 (-)
Gene ID: Rep_2_c_0_114
Type: CAZyme
Location: 139600 - 141000 (-)
Type: CAZyme
Location: 139600 - 141000 (-)
Taxonomic Lineage
Domain
Archaea
Phylum
Thermoplasmatota
Class
Thermoplasmata
Order
Methanomassiliicoccales
Family
Methanomassiliicoccaceae
Genus
Methanomassiliicoccus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.